BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A07LP1|AL425963
(812 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1653 1570 0.0
>3x_Contig1653
Length = 14012
Score = 1570 bits (790), Expect = 0.0
Identities = 805/812 (99%)
Strand = Plus / Minus
Query: 1 gatccaagtcaaccacaggtcaagagaccagctagttcagatgaacagccgttggctaag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 9365 gatccaagtcaaccacaggtcaagagaccagctagttcagatgaacagccgtcggctaag 9306
Query: 61 aaaacggatrgbcccacttccaaaggtatcgctcatttgaaaccagaatttatcttgttc 120
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9305 aaaacggatactgccacttccaaaggtatcgctcatttgaaaccagaatttatcttgttc 9246
Query: 121 aatgatcaaaatggtagttccaggcctatggcaggcgagtataacgacgaagaagagtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9245 aatgatcaaaatggtagttccaggcctatggcaggcgagtataacgacgaagaagagtcc 9186
Query: 181 acgtcttctcgtcttgaatctcaaccggcaaatcaaataaagggtaagaaacaaaacagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9185 acgtcttctcgtcttgaatctcaaccggcaaatcaaataaagggtaagaaacaaaacagt 9126
Query: 241 aagaagaaaagaggtcaaaacaagaaccgtgataacagacaagtgagagaacagcacgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9125 aagaagaaaagaggtcaaaacaagaaccgtgataacagacaagtgagagaacagcacgct 9066
Query: 301 ctttgttcgaaatttgtcactaacgtcgatgctacctgttcttttgatactaagtgtagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9065 ctttgttcgaaatttgtcactaacgtcgatgctacctgttcttttgatactaagtgtagg 9006
Query: 361 tacgtgcatgatgtgagagagttcttgtctaagawagcccctgagattaaaaccgagttt 420
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 9005 tacgtgcatgatgtgagagagtacttgtctaagaaagcccctgagattaaaaccgagttt 8946
Query: 421 ttccccatatgtccagtttggcaatctttgggacattgtcccatgggttacaaatgttgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8945 ttccccatatgtccagtttggcaatctttgggacattgtcccatgggttacaaatgttgt 8886
Query: 481 ttcctttcctcgcattgtaatatggagactctggaattaaaagatctgtacgaggtggat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8885 ttcctttcctcgcattgtaatatggagactctggaattaaaagatctgtacgaggtggat 8826
Query: 541 gagaggaaaaagctttatgaggctaaccatgagatcaatcacatagacggtgaaaggaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8825 gagaggaaaaagctttatgaggctaaccatgagatcaatcacatagacggtgaaaggaag 8766
Query: 601 tatgatctaattaagagaagattctcattcacgaagagcgattatatattagagattatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8765 tatgatctaattaagagaagattctcattcacgaagagcgattatatattagagattatt 8706
Query: 661 gatgccatgcaacaagagaatagagatttaatgaacacttcaaagggttctgaaacaact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8705 gatgccatgcaacaagagaatagagatttaatgaacacttcaaagggttctgaaacaact 8646
Query: 721 acagatgctaatgctggtgaagacgctaatgatgaaaaggtctcatttcaagcaactgaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8645 acagatgctaatgctggtgaagacgctaatgatgaaaaggtctcatttcaagcaactgaa 8586
Query: 781 aaacaaaaccaactaacggagaaaagagaaag 812
||||||||||||||||||||||||||||||||
Sbjct: 8585 aaacaaaaccaactaacggagaaaagagaaag 8554
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6376
Number of Sequences: 1807
Number of extensions: 6376
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 812
length of database: 10,358,551
effective HSP length: 16
effective length of query: 796
effective length of database: 10,329,639
effective search space: 8222392644
effective search space used: 8222392644
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)